Ok, so when you say references, do you mean:
<?php include "cms/Connections/localhost.php"; ?>
<?php include "cms/WA_CMS/WA_CMS.php"; ?>
Cause I have done that. If that's not what you mean, then could you explain to me where and how I add the references and the content code reference (which is what I thought adding the <?php echo WA_getCMSContent($database_localhost, $localhost,"home", "main"); ?> was, was the content code. The above was adding the connection reference etc, and the one I just pasted was the content reference. After adding those on all of my pages, they should show up in the system for my client to edit then right? I am so confused. Not sure if I made the right decision with this one, ya know?