Thanks again for your help you guys are the best.
Well that kind of worked, it still has the same thing happening. But if you hit the back button from the 404 page and retry it or refresh the page it is fixed. So I thought it was just that my browser was using a cashed page. However it is not a cashed page, clearing the temp files, using four different computers some that have never been to my site and using two different browsers (internet explorer and firefox). No matter what I do when I go back to the site, It still happens. If you use the side menu to go to a category and just mouse over the next link at the top of the page you'll see the address is missing the site name. but if you refresh the page and mouse over it again it is fixed. Go back to the home page and try it again and it is broken again. Give it a try www.itstime2shop.com
Not sure why it's not working, but I'm sure you can figure it out you're one of the best.
If we need to do a ticket thing like last time and remotely connect I'm free friday as I have it off.
Thanks again Jason for all your help in this matter.