navigation links resolve to wrong ulr

The menu on the index page is controlled with the cssmw_home > menu.php file and the content menu is controlled with the cssmw_content > menu.php file.
In here at the top of the file you will have your root values like this:
$WA_localRoot = "/sa/";
$WA_remoteRoot = "/";
This is where you need to adjust the paths. You should see one with the httpdocs in it and remove this part of the URL if it is interfering with your menu.

Thank you. I have changed the "httpdocs" within the quotation marks with a "/" forward slash as I believe this is what you meant by "removing it" correct? It works...Thank you very much.